Wednesday, March 14, 2007

In the Image of God?

Albert Mohler, President of The Southern Baptist Theological Seminary has an interesting article "Is Your Baby Gay?" on what our new knowledge of the biological basis of homosexuality might mean in terms of ethics. He is actually saying what I have feared some people might propose be done...namely do gene or hormonal therapy, if necessary prenatally, to eliminate or lessen the chance of an individual becoming homosexual. Among what I see as the theological contradictions in his article is this one:

"The biblical basis for establishing the dignity of all persons -- the fact that all humans are made in God's image -- reminds us that this means all persons, including those who may be marked by a predisposition toward homosexuality. For the sake of clarity, we must insist at all times that all persons -- whether identified as heterosexual, homosexual, lesbian, transsexual, transgendered, bisexual, or whatever -- are equally made in the image of God."
If this is correct, what's to change? At least both he and I can agree that fetuses that might be identified as homosexual (not sure a fetus CAN be homosexual) should not be aborted...but I suspect our arrival at that agreement is from very different positions.

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Update on gender discrimination cases...

According to a report in Beliefnet, Transgender, Julie Nemecek, who had been fired from her teaching job at Spring Arbor University has settled with the school in negotiations mediated by the Equal Employment Opportunity Commission. Details of the settlement are being kept private but Nemecek is quoted as saying "both walked away happy."

Meanwhile in Florida, transgender Susan(Steve) Stanton has decided to appeal her case to the Largo City Commission which earlier had voted to fire Stanton for disclosing that she is undergoing hormone replacement therapy and planning to have sexual reassignment surgery. The appeal was scheduled for March 23, though according to the report in the St Petersburg Times , her attorney has a conflict on that date but the commission refused to move the date to a time in April.

Other links:

His Second Self. A very good article about Stanton's history and struggles to come to grips with gender identity and the toll this has taken on her relationship with her family.

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Crawling with transitional forms...

Creationists are fond of claiming that there is a lack of transitional fossils. Well here is another one:
Scientific American: From Jaw to Ear: Transition Fossil Reveals Ear Evolution in Action
Now hear this: early mammal fossil shows how sensitive ear bones evolved.

As Larry Martin said in response to creationist claims: "My drawers are crawling with transitional forms-" uh, meaning his fossil storage drawers of course.

Monday, March 12, 2007

Sean Carroll's Making of the Fittest

In his earlier book, Endless Forms Most Beautiful (reviewed here) Sean Carroll took biologists to task in terms of how we teach evolution saying:

"Let's show students embryos, Hox clusters, stripes, spots and all the glory of making of animal form. The evolutionary concepts will follow naturally."

Carroll's fascinating new book, The Making of the Fittest(Norton) follows this strategy by taking a more general look at evolution focusing not only on the forms but also how they are connected to the evolutionary patterns revealed in the DNA. He starts out with a discussion of DNA in forensics, noting the contrast between the acceptance of DNA evidence in forensics with the skepticism in our society about evolution.

He considers it ironic that while people are almost 100% supportive about DNA evidence in the court room, more than 50% of citizens in the United States deny that evolution happens even though the patterns revealed by DNA studies speak more strongly than any other evidence about the reality of evolution. The goal of his new book is to make the case for the reality of evolution beyond any reasonable doubt. He clearly is taking on anti evolutionist and lawyer Phillip Johnson who in his writings during the 1990's tried to cast doubt on the reality of evolution, even though he does not once cite or mention Johnson.

Chapter one introduces us to a fascinating informal grouping of fish called "ice fish" which has a suite of adaptations to the extremely cold waters of the antarctic and he returns to these fish throughout the text to illustrate some of the patterns revealed in the DNA of many organisms.

Chapter two gives a brief and painless introduction to the mathematics of evolution emphasizing the power of even modest amounts of natural selection to affect evolutionary change in populations. He clearly explains the key concepts related to some classic examples of natural selection such as the Pepper moth and industrial melanism, so badly mangled by creationist Jonathan Wells in his Icons of Evolution.

One of the strongest sections is his discussion of fossil genes- for instance, the genes related to smell in which the number of pseudo genes or no longer functioning genes is highest in mammals with color vision. For instance mice have about 160 functional Vtr olfactory receptor genes while of the 200 such genes in our genome in our genome only 5 are functional, the rest are fossil genes. He hammers at this pattern with example after example so that by the time the punch line comes the reader is well prepared. The punch line of course is that fossil genes are evidence against two common erroneous notions: that evolution is progressive and that design or intent are involved in the development of life.

Later, he takes on another creationist canard, namely that evolution cannot give rise to novel biological forms and complexity and he makes his case convincingly using one of the favorite examples of creationists, namely the eye. He discusses the genetic underpinnings involved in the development of animal eyes, and in the rest of the chapter hammers creationist claims with example after example of complexity arising in the absence of an intelligent designer. He picks up one the themes of his research namely that animals share a common tool kit of genes involved in development and body planning.

Next he draws parallels between the tactics of anti evolutionists to Lysenkoism, and opposition of Chiropractors to vaccination noting in all three groups the same basic six strategies to under cut empirical science:

1. Doubt the science
2. Question the motives of scientists
3. Magnify disagreements among scientists and cite gadflies as authorities
4. Exaggerate potential harm
5. Appeal to personal freedom
6. Claim that acceptance (say of evolution or vaccination) repudiates key philosophy

I had to smile at these since this six fold strategy is exactly the one used by the previous Kansas Board of Education in its "hearings" on evolution the other year.

The book also gives many of the standard but important examples of the application of evolution to human problems and ends with a sobering look at how we are inadvertently causing the demise of fisheries due to poorly thought out and unintentional experiments in natural selection. The ending of the book is quite sobering noting that while we debate the existence of evolution our inadvertent evolutionary experiments are destroying the Earth's marine resources.

He leaves us with the question:

"Will we heed these facts and accept our responsibility...or will cod, tuna, marlin, blue whales, dugongs, icefish and more become as rare as palm trees in Wyoming".

The book is a great exercise in clear critical thinking. It is also highly accessible to the non biologist and I hope it has wide circulation.

Other Links:
Interview with Sean Carroll.
Sean Carroll's home page(http://www.molbio.wisc.edu/carroll/)

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Sunday, March 11, 2007

It's salamander time again!

Last Spring I reported a salamander rescue in Lawrence Kansas. Well, as you can see in the photo, natural selection has led to a new improved salamander-bright yellow for easy visibility, larger size for quicker crossing and heavily armored exterior.

Actually the photo is from the Biologically Inspired Robots Group at EPFL in Switzerland.




Photograph by A.Herzog, courtesy Biologically Inspired Robotics Group, EPFL

This group of roboticists is interested in modeling animal locomotion both to gain insight into how to design systems to coordinate robotic movement and to understand the evolution of animal locomotion. The scientists began with a model of lamprey locomotion, lampreys being relatively simple aquatic vertebrates, and built a lamprey robot to test their understanding of this organism's coordination.






They then were able to show how the same basic control systems are able to coordinate movement of a terrestrial animal, that is a salamander, with very minor changes in the characteristics of the control system.

Lamprey photo courtesy of the Fish and Wild Life Service.

Non scientists often accuse scientists of being reductionistic. But such criticism misses a key aspect of science, and that is once scientists think they understand how something works in terms of its parts, scientists routinely attempt to test their understanding by putting the parts together to see how the resulting construct compares with the original whole.

This applies to understanding salamander locomotion in order to answer basic questions about evolution and robotics as well as deep problems such do we understand enough about how cells work to make an artificial cell that mimics the features of natural cells. This problem is still out of reach but as this article shows we are making progress. It is this synthetic (dare I use holistic) aspect of science that gives science its explanatory power whether we are talking cells, salamanders or evolution.

Links:
Lamprey Locomotion
Salamandra Robotica

References:

A.J. Ijspeert, A. Crespi, D. Ryczko, and J.M. Cabelguen. From swimming to walking with a salamander robot driven by a spinal cord model. Science, 9 March 2007, Vol. 315. no. 5817, pp. 1416 - 1420, 2007.

A.J. Ijspeert, A. Crespi, and J.M. Cabelguen. Simulation and robotics studies of salamander locomotion. Applying neurobiological principles to the control of locomotion in robots. Neuroinformatics, 3(3):171-196, 2005.
[ bib | .pdf ]

A.J. Ijspeert. A connectionist central pattern generator for the aquatic and terrestrial gaits of a simulated salamander. Biological Cybernetics, 84(5):331-348, 2001.
[ bib | .ps.gz | .pdf ]




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Move over seals...

even sloths are cute as babies:

Last time I checked...

...this is the 21st century. So why are people upset about perfectly good anatomical terms, or firing people from a job because of alleged witchcraft? Last week technicians were running around my school making sure computers could handle early springing forward. Obviously some people are way behind.

Some Gender Hysteria

Really folks this is the 21 Century but I guess old typological habits die hard. Witness these two bits of gender hysteria. First from Largo Florida, the city manager of 14 years is being fired for being a "transsexual" and wanting to transition from male to female, according to an article in the South Florida News Press.

Supposedly, according to one of the City Commissioners, Mary Gray Black, Stanton's announcement:

"caused stress, turmoil, distraction and work disruption" She says further:

"I do not feel he has the integrity, nor the trust, nor the respect, nor the confidence to continue as the city manager of the city of Largo..."

Personally I agree with the St. Petersburg Times which notes Stanton's skill and says that officials ought to be judged on this rather than their sex. I wonder if Stanton would be in the same fix were he gay rather than transgendered.

Of course the conservatives such as Mrs Black who want to fire Stanton carefully craft their reasoning so that it appears that they are firing him for other reasons such as the city doesn't trust Stanton anymore. Ya right. The Delightful Yank down in Largo is following this controversy closely.

By the way Black won a narrow election posing as a family values candidate with the slogan:
"To God be the glory." Seems like the God she worships must be a different one than mine.

See http://www.savestanton.com.

OK...as if this wasn't enough, hop on over to Michigan and Spring Arbor University where Julie Nemecek, a long standing faculty member who served as an associate dean is being fired for being a transsexual. SAU is a private religious University so I suppose one could say they have a right to do what they think is consistent with their teachings or at least their interpretation of scripture.

But where does the right of private association end and public accommodation begin? In housing and other public accommodations such discrimination is generally illegal but employment especially by private employers is another matter. I am quite pleased to see that some community colleges are reviewing their association with SAU in light of the schools actions.

More press coverage here covers Nemecek's development and coming out process, and I can relate to many of the things she went through when young and as an adult dealing with my own gender issues. Some of my previous blogging on these sorts of issues is at:

Sex roles and gender identity

Are Gender Identity conflicts a disease?

July 2000.

Is this the New Approach to Ministry for GLBT people?

Gender Identity Proposal in NYC.


A good discussion of some of the legal issues raised by these cases, especially the Stanton case is at Transgender Workplace Diversity. This blog notes, with respect to the Nemecek case, that:

"...the school’s website does not indicate that the school is supported, controlled or managed by a religion. Therefore, it is going to have to show a BFOQ. But Nemecek is not a clergyman or a teacher of religious classes, and it doesn’t hire only religious Wesleyan Protestants (the school’s denomination). Its curriculum is not directed solely to the propagation of a religion, since most of its courses are secular. In fact, its website discloses that its mission is based on what it calls “The Concept,” which includes secular as well as religious aims. “The Concept goes to the heart of our mission as a university. By anchoring our mission to the 'lifelong involvement in the study and application of the liberal arts,' we connect with a 2,500 year history dating back to Socrates, Plato and Aristotle." http://www.arbor.edu/pdf/keepingtheconcept.pdf This doesn’t bode well for its BFOQ defense."

We shall see. Either of these cases could end up setting important legal precedent in the battle for the right of gender expression. In the meantime, prepare for lots of scare tactics and misinformation from certain conservative groups about these issues. Gender, after all, is a favorite hot button issue of the right.


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